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Bioinformatics Journal Club (2S)

392172 Stoye Summer 2019 Monday 16-18 in U10-155

Contents

We read and discuss current research articles from different fields in computational biology. The specific topics will be selected at the beginning of the semester.

To get credit points, students have to show proficiency in reading, discussing and presenting original research papers and other scientific literature.

Schedule

Date Topic Name
01.04.2019 choosing a topic all
08.04.2019 JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework Hussamadin M. Kadhim
15.04.2019 The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms Jens Stoye
22.04.2019 (Easter Monday) –
29.04.2019 Eric Demaine, Advanced Data Structures, Lecture 15: Least Common & Level Ancestors Fábio H. V. Martinez
06.05.2019 (CeBiTec Colloquium) –
13.05.2019 Eric Demaine, Advanced Data Structures, Lecture 15: Least Common & Level Ancestors (cont'd) Fábio H. V. Martinez
20.05.2019 Eric Demaine, Advanced Data Structures, Lecture 16: Strings Fábio H. V. Martinez
27.05.2019 Eric Demaine, Advanced Data Structures, Lecture 16: Strings (cont'd)
Eric Demaine, Advanced Data Structures, Lecture 17: Succinct Rank, Select, & Tries 		Fábio H. V. Martinez
03.06.2019 Eric Demaine, Advanced Data Structures, Lecture 17: Succinct Rank, Select, & Tries (cont'd) Fábio H. V. Martinez
10.06.2019 (Whit Monday) –
17.06.2019 (Aggi Day) –
24.06.2019 Influence of neighboring small sequence variants on functional impact prediction Jan-Simon Baasner
01.07.2019 (Jens away) –
08.07.2019 Alignment- and reference-free phylogenomics with colored de-Bruijn graphs Andreas Rempel

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